R/Steelhead-Puget-Sound-DPS-PSsteelhead2020.R
Steelhead-Puget-Sound-DPS-PSsteelhead2020.Rd
Spawner and fraction wild data. Species: Steelhead. Method: Survey. View raw data or Download raw data
A csv file.
For certain populations, there are multiple types of spawner count data. For example survey and model counts that are based on different methods. In this case, the 'Series' column gives a name for the dataset to distinguish it from other data sets of the same population.
ESU or DPS name.
Species name.
Method for the spawner count. Survey refers to a spawning ground survey; the count itself is an expansion. See the SPS (database link in sources below) for the details for the data. LadderCount is a weir or dam count. Model refers to the DABOM model that expands from PIT tag data. GSI is an expansion based on the BOXCAR model, which uses GSI to allocate fish sampled at Lower Granite Dam.
Major population group within the ESU or DPS.
NWFSC id for the population.
Long population name.
Shorter population name used in Viability Report figures and tables.
Run timing (fall, winter, spring, etc). If missing, see the ESU/DPS name or may not be applicable for the species.
Integer in XXXX format. The year that the count was made. See details for ESU or DPS specific comments.
Total spawners or escapement count. -99 means missing count. May be integer or decimal.
Decimal between 0 and 1. Fraction wild or natural. -99 means missing information.
Data contributor. Listed under Source below.
NWFSC staff who compiled the data file: Katie Barnes
Data citation. Listed under References below.
Washington Department of Fish and Wildlife
Ford, M.J., et al. 2022. Biological Viability Assessment Update for Pacific Salmon and Steelhead Listed Under the Endangered Species Act: Pacific Northwest. U.S. Department of Commerce, NOAA Technical Memorandum NMFS-NWFSC-171. https://doi.org/10.25923/kq2n-ke70
Salmon Population Summaries (SPS) Database: https://www.fisheries.noaa.gov/resource/tool-app/salmon-population-summaries-sps
Original source:
Samish River and Bellingham Bay Tributaries - winter Steelhead: Puget Sound Steelhead Natural Origin Spawner Abundance Dataset (1979-2018). Spawner abundance Data. Washington Department of Fish and Wildlife. Protocols and Methods available at https://fortress.wa.gov/dfw/score/score/species/steelhead.jsp?species=Steelhead. Accessed from WA SCORE on March 9, 2021 by Katie Barnas, NOAAF NWFSC.
Nooksack River - winter Steelhead: Puget Sound Steelhead Natural Origin Spawner Abundance Dataset (2004-2018). Spawner abundance Data. Washington Department of Fish and Wildlife. Protocols and Methods available at https://fortress.wa.gov/dfw/score/score/species/steelhead.jsp?species=Steelhead. Accessed from WA SCORE on March 9, 2021 by Katie Barnas, NOAAF NWFSC.
Skagit River - summer and winter Steelhead: Puget Sound Steelhead Natural Origin Spawner Abundance Dataset (1978-2019). Spawner abundance Data. Washington Department of Fish and Wildlife. Protocols and Methods available at https://fortress.wa.gov/dfw/score/score/species/steelhead.jsp?species=Steelhead. Accessed from WA SCORE on March 9, 2021 by Katie Barnas, NOAAF NWFSC.
Stillaguamish River - winter Steelhead: Puget Sound Steelhead Natural Origin Spawner Abundance Dataset (1985-2019). Spawner abundance Data. Washington Department of Fish and Wildlife. Protocols and Methods available at https://fortress.wa.gov/dfw/score/score/species/steelhead.jsp?species=Steelhead. Accessed from WA SCORE on March 9, 2021 by Katie Barnas, NOAAF NWFSC.
Snohomish/Skykomish Rivers - winter Steelhead: Puget Sound Steelhead Natural Origin Spawner Abundance Dataset (1981-2019). Spawner abundance Data. Washington Department of Fish and Wildlife. Protocols and Methods available at https://fortress.wa.gov/dfw/score/score/species/steelhead.jsp?species=Steelhead. Accessed from WA SCORE on March 9, 2021 by Katie Barnas, NOAAF NWFSC.
Pilchuck River - winter Steelhead: Puget Sound Steelhead Natural Origin Spawner Abundance Dataset (1981-2019). Spawner abundance Data. Washington Department of Fish and Wildlife. Protocols and Methods available at https://fortress.wa.gov/dfw/score/score/species/steelhead.jsp?species=Steelhead. Accessed from WA SCORE on March 9, 2021 by Katie Barnas, NOAAF NWFSC.
Tolt River - summer Steelhead: Puget Sound Steelhead Natural Origin Spawner Abundance Dataset (1985-2019). Spawner abundance Data. Washington Department of Fish and Wildlife. Protocols and Methods available at https://fortress.wa.gov/dfw/score/score/species/steelhead.jsp?species=Steelhead. Accessed from WA SCORE on March 9, 2021 by Katie Barnas, NOAAF NWFSC.
Snoqualmie River - winter Steelhead: Puget Sound Steelhead Natural Origin Spawner Abundance Dataset (1981-2019). Spawner abundance Data. Washington Department of Fish and Wildlife. Protocols and Methods available at https://fortress.wa.gov/dfw/score/score/species/steelhead.jsp?species=Steelhead. Accessed from WA SCORE on March 9, 2021 by Katie Barnas, NOAAF NWFSC.
North Lake Washington and Lake Sammamish - winter Steelhead: Puget Sound Steelhead Natural Origin Spawner Abundance Dataset (1984-1999). Spawner abundance Data. Washington Department of Fish and Wildlife. Protocols and Methods available at https://fortress.wa.gov/dfw/score/score/species/steelhead.jsp?species=Steelhead. Accessed from WA SCORE on March 9, 2021 by Katie Barnas, NOAAF NWFSC.
Cedar River - winter Steelhead: Puget Sound Steelhead Natural Origin Spawner Abundance Dataset (1984-2019). Spawner abundance Data. Washington Department of Fish and Wildlife. Protocols and Methods available at https://fortress.wa.gov/dfw/score/score/species/steelhead.jsp?species=Steelhead. Accessed from WA SCORE on March 9, 2021 by Katie Barnas, NOAAF NWFSC.
Green River - winter Steelhead: Puget Sound Steelhead Natural Origin Spawner Abundance Dataset (1978-2019). Spawner abundance Data. Washington Department of Fish and Wildlife. Protocols and Methods available at https://fortress.wa.gov/dfw/score/score/species/steelhead.jsp?species=Steelhead. Accessed from WA SCORE on March 9, 2021 by Katie Barnas, NOAAF NWFSC.
White River - winter Steelhead: Puget Sound Steelhead Natural Origin Spawner Abundance Dataset (1983-2018). Spawner abundance Data. Washington Department of Fish and Wildlife. Protocols and Methods available at https://fortress.wa.gov/dfw/score/score/species/steelhead.jsp?species=Steelhead. Accessed from WA SCORE on March 9, 2021 by Katie Barnas, NOAAF NWFSC.
Puyallup River/Carbon River - winter Steelhead: Puget Sound Steelhead Natural Origin Spawner Abundance Dataset (1992-2019). Spawner abundance Data. Washington Department of Fish and Wildlife. Protocols and Methods available at https://fortress.wa.gov/dfw/score/score/species/steelhead.jsp?species=Steelhead. Accessed from WA SCORE on March 9, 2021 by Katie Barnas, NOAAF NWFSC.
Nisqually River - winter Steelhead: Puget Sound Steelhead Natural Origin Spawner Abundance Dataset (1980-2019). Spawner abundance Data. Washington Department of Fish and Wildlife. Protocols and Methods available at https://fortress.wa.gov/dfw/score/score/species/steelhead.jsp?species=Steelhead. Accessed from WA SCORE on March 9, 2021 by Katie Barnas, NOAAF NWFSC.
South Hood Canal Tributaries - winter Steelhead: Puget Sound Steelhead Natural Origin Spawner Abundance Dataset (1998-2019). Spawner abundance Data. Washington Department of Fish and Wildlife. Protocols and Methods available at https://fortress.wa.gov/dfw/score/score/species/steelhead.jsp?species=Steelhead. Accessed from WA SCORE on March 9, 2021 by Katie Barnas, NOAAF NWFSC.
East Hood Canal Tributaries - winter Steelhead: Puget Sound Steelhead Natural Origin Spawner Abundance Dataset (1981-2019). Spawner abundance Data. Washington Department of Fish and Wildlife. Protocols and Methods available at https://fortress.wa.gov/dfw/score/score/species/steelhead.jsp?species=Steelhead. Accessed from WA SCORE on March 9, 2021 by Katie Barnas, NOAAF NWFSC.
Skokomish River - winter Steelhead: Puget Sound Steelhead Natural Origin Spawner Abundance Dataset (1982-2019). Spawner abundance Data. Washington Department of Fish and Wildlife. Protocols and Methods available at https://fortress.wa.gov/dfw/score/score/species/steelhead.jsp?species=Steelhead. Accessed from WA SCORE on March 9, 2021 by Katie Barnas, NOAAF NWFSC.
West Hood Canal Tributaries - winter Steelhead: Puget Sound Steelhead Natural Origin Spawner Abundance Dataset (1995-2018). Spawner abundance Data. Washington Department of Fish and Wildlife. Protocols and Methods available at https://fortress.wa.gov/dfw/score/score/species/steelhead.jsp?species=Steelhead. Accessed from WA SCORE on March 9, 2021 by Katie Barnas, NOAAF NWFSC.
Dungeness River - summer and winter Steelhead: Puget Sound Steelhead Natural Origin Spawner Abundance Dataset (1988-2019). Spawner abundance Data. Washington Department of Fish and Wildlife. Protocols and Methods available at https://fortress.wa.gov/dfw/score/score/species/steelhead.jsp?species=Steelhead. Accessed from WA SCORE on March 9, 2021 by Katie Barnas, NOAAF NWFSC.
Strait of Juan de Fuca Tributaries - winter Steelhead: Puget Sound Steelhead Natural Origin Spawner Abundance Dataset (1984-2018). Spawner abundance Data. Washington Department of Fish and Wildlife. Protocols and Methods available at https://fortress.wa.gov/dfw/score/score/species/steelhead.jsp?species=Steelhead. Accessed from WA SCORE on March 9, 2021 by Katie Barnas, NOAAF NWFSC.
Elhwa Steelhead: Puget Sound Steelhead Natural Origin Spawner Abundance Dataset (2013-2018). Spawner abundance Data. Washington Department of Fish and Wildlife. Protocols and Methods available at https://fortress.wa.gov/dfw/score/score/species/steelhead.jsp?species=Steelhead. Accessed from WA SCORE on March 9, 2021 by Katie Barnas, NOAAF NWFSC.
data('Steelhead-Puget-Sound-DPS-PSsteelhead2020')
library(ggplot2)
out$NUMBER_OF_SPAWNERS[out$NUMBER_OF_SPAWNERS==-99] <- NA
ggplot(out, aes(x=YEAR, y=NUMBER_OF_SPAWNERS)) +
geom_point(na.rm = TRUE) +
ggtitle('Steelhead-Puget-Sound-DPS-PSsteelhead2020') +
facet_wrap(~COMMON_POPULATION_NAME) +
theme(axis.text.x = element_text(angle = 45, vjust = 1, hjust=1),
strip.text.x = element_text(size = 6))
out$FRACWILD[out$FRACWILD == -99] <- NA
ggplot(out, aes(x=YEAR, y=FRACWILD)) +
geom_point(na.rm = TRUE) +
ggtitle('Fraction Wild') +
ylim(0,1) +
facet_wrap(~COMMON_POPULATION_NAME) +
theme(axis.text.x = element_text(angle = 45, vjust = 1, hjust=1),
strip.text.x = element_text(size = 6))